Uses of Class
org.obolibrary.oboformat.model.Clause

Packages that use Clause

Package	Description
org.obolibrary.obo2owl	OBO to OWL.
org.obolibrary.oboformat.diff	Diff package.
org.obolibrary.oboformat.model	OBO Model.
org.obolibrary.oboformat.parser	OBO parser.
org.obolibrary.oboformat.writer

Uses of Clause in org.obolibrary.obo2owl

Methods in org.obolibrary.obo2owl that return types with arguments of type Clause

Modifier and Type	Method and Description
static List<Clause>	OWLAPIOwl2Obo.normalizeRelationshipClauses(List<Clause> clauses) Join clauses and its QualifierValue which have the same relationship type and target.

Method parameters in org.obolibrary.obo2owl with type arguments of type Clause

Modifier and Type	Method and Description
static List<Clause>	OWLAPIOwl2Obo.normalizeRelationshipClauses(List<Clause> clauses) Join clauses and its QualifierValue which have the same relationship type and target.
Set<OWLAxiom>	OWLAPIObo2Owl.trTermFrameClauses(OWLClass cls, Collection<Clause> clauses, String t) Translate term frame clauses.

Uses of Clause in org.obolibrary.oboformat.diff

Methods in org.obolibrary.oboformat.diff that return Clause

Modifier and Type	Method and Description
Clause	Diff.getClause1()
Clause	Diff.getClause2()

Methods in org.obolibrary.oboformat.diff with parameters of type Clause

Modifier and Type	Method and Description
void	Diff.setClause1(Clause clause1)
void	Diff.setClause2(Clause clause2)

Constructors in org.obolibrary.oboformat.diff with parameters of type Clause

Constructor and Description
Diff(String ftype, String type, Frame f1, Frame f2, Clause c, int n)

Uses of Clause in org.obolibrary.oboformat.model

Methods in org.obolibrary.oboformat.model that return Clause

Modifier and Type	Method and Description
Clause	Frame.getClause(OBOFormatConstants.OboFormatTag tag)
Clause	Frame.getClause(String tag)
Clause	Clause.withValue(String value)

Methods in org.obolibrary.oboformat.model that return types with arguments of type Clause

Modifier and Type	Method and Description
Collection<Clause>	Frame.getClauses()
List<Clause>	Frame.getClauses(OBOFormatConstants.OboFormatTag tag)
List<Clause>	Frame.getClauses(String tag)

Methods in org.obolibrary.oboformat.model with parameters of type Clause

Modifier and Type	Method and Description
void	Frame.addClause(Clause cl)

Method parameters in org.obolibrary.oboformat.model with type arguments of type Clause

Modifier and Type	Method and Description
void	Frame.setClauses(Collection<Clause> clauses)

Uses of Clause in org.obolibrary.oboformat.parser

Methods in org.obolibrary.oboformat.parser that return Clause

Modifier and Type	Method and Description
Clause	OBOFormatParser.parseTermFrameClause()
Clause	OBOFormatParser.parseTypedefFrameClause()

Methods in org.obolibrary.oboformat.parser with parameters of type Clause

Modifier and Type	Method and Description
void	OBOFormatParser.parseEOL(Clause cl)

Uses of Clause in org.obolibrary.oboformat.writer

Methods in org.obolibrary.oboformat.writer with parameters of type Clause

Modifier and Type	Method and Description
static void	OBOFormatWriter.write(Clause clause, Writer writer, OBOFormatWriter.NameProvider nameProvider) Write.
static void	OBOFormatWriter.writeDef(Clause clause, Writer writer) Write def.
static void	OBOFormatWriter.writePropertyValue(Clause clause, Writer writer) Write property value.
static void	OBOFormatWriter.writeSynonym(Clause clause, Writer writer) Write synonym.

Method parameters in org.obolibrary.oboformat.writer with type arguments of type Clause

Modifier and Type	Method and Description
static void	OBOFormatWriter.sortTermClauses(List<Clause> clauses) Sort a list of term frame clauses according to in the OBO format specified tag and value order.