org.obolibrary.macro

Class MacroExpansionGCIVisitor

java.lang.Object

org.obolibrary.macro.MacroExpansionGCIVisitor

public class MacroExpansionGCIVisitor
extends Object

Macro expansion GCI visitor.

Constructor Summary

Constructors

Constructor and Description
MacroExpansionGCIVisitor(OWLOntologyManager outputManager, OWLOntology inputOntology, boolean shouldAddExpansionMarker)
MacroExpansionGCIVisitor(OWLOntology inputOntology, OWLOntologyManager outputManager, boolean preserveAnnotationsWhenExpanding)

Method Summary

Modifier and Type	Method and Description
OWLOntology	createGCIOntology()
void	setPreserveAnnotationsWhenExpanding(boolean preserveAnnotationsWhenExpanding)
boolean	shouldPreserveAnnotationsWhenExpanding()

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MacroExpansionGCIVisitor

public MacroExpansionGCIVisitor(OWLOntology inputOntology,
                                OWLOntologyManager outputManager,
                                boolean preserveAnnotationsWhenExpanding)

Parameters:

inputOntology - ontology to use

outputManager - manager for ontology creation

preserveAnnotationsWhenExpanding - true if annotations should be preserved when expanding

MacroExpansionGCIVisitor

public MacroExpansionGCIVisitor(OWLOntologyManager outputManager,
                                OWLOntology inputOntology,
                                boolean shouldAddExpansionMarker)

Parameters:

outputManager - output manager

inputOntology - input ontology

shouldAddExpansionMarker - should expansion marker be added

Method Detail

createGCIOntology

public OWLOntology createGCIOntology()

Returns:

ontology for general concept expansion

shouldPreserveAnnotationsWhenExpanding

public boolean shouldPreserveAnnotationsWhenExpanding()

Returns:

true if annotations should be preserved

setPreserveAnnotationsWhenExpanding

public void setPreserveAnnotationsWhenExpanding(boolean preserveAnnotationsWhenExpanding)

Parameters:

preserveAnnotationsWhenExpanding - new value