org.obolibrary.oboformat.parser

Class XrefExpander

java.lang.Object

org.obolibrary.oboformat.parser.XrefExpander

public class XrefExpander
extends Object

Xref expander.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	XrefExpander.EquivalenceExpansion Equivalence expansion.
class	XrefExpander.GenusDifferentiaExpansion Genus diff expansion.
class	XrefExpander.HasSubClassExpansion Subclass expansion.
class	XrefExpander.IsaExpansion Is a expansion.
class	XrefExpander.RelationshipExpansion Relationship expansion.
class	XrefExpander.ReverseGenusDifferentiaExpansion Reverse genus differentia expansion.
class	XrefExpander.Rule Rule.

Constructor Summary

Constructors

Constructor and Description
XrefExpander(OBODoc src)
XrefExpander(OBODoc src, OBODoc tgt)
XrefExpander(OBODoc src, String targetBase)

Method Summary

Modifier and Type	Method and Description
void	expandXrefs() Expand xref list.
OBODoc	getTargetDoc(String idSpace)
void	setUp() Setup expander.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

XrefExpander

public XrefExpander(OBODoc src)

Parameters:

src - source document

XrefExpander

public XrefExpander(OBODoc src,
                    String targetBase)

Parameters:

src - source document

targetBase - target base

XrefExpander

public XrefExpander(OBODoc src,
                    OBODoc tgt)

Parameters:

src - source

tgt - target

Method Detail

setUp

public final void setUp()

Setup expander.

getTargetDoc

public OBODoc getTargetDoc(String idSpace)

Parameters:

idSpace - id space

Returns:

target doc

expandXrefs

public void expandXrefs()

Expand xref list.